WormBase Tree Display for CDS: PPA39172
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PPA39172 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 9 | |||
76 | 174 | |||||
220 | 325 | |||||
381 | 477 | |||||
560 | 616 | |||||
682 | 811 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S278-1.5 | ||
DB_remark | contains similarity to Pfam domain PF03098 (Animal haem peroxidase); contains similarity to Interpro domains IPR019791 (Haem peroxidase, animal-type), IPR037120 (Haem peroxidase domain superfamily, animal type), IPR010255 (Haem peroxidase superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277541 | ||||
Corresponding_transcript | PPA39172.1 | |||||
Corresponding_protein | PP73663 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |