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WormBase Tree Display for CDS: PPA39175

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Name Class

PPA39175SMapS_parentSequencePPA_ChrI
StructureSource_exons (26)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S278-1.13
DB_remarkcontains similarity to Pfam domains PF00651 (BTB/POZ domain), PF01344 (Kelch motif), PF07707 (BTB And C-terminal Kelch); contains similarity to Interpro domains IPR030605 (), IPR000210 (BTB/POZ domain), IPR006652 (Kelch repeat type 1), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR011705 (BTB/Kelch-associated), IPR015915 (Kelch-type beta propeller)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00277544
Corresponding_transcriptPPA39175.1
Corresponding_proteinPP71751
Corresponding_oligo_setGPL14372_Probes_73499
GPL14372_Probes_73500
GPL14372_Probes_73501
GPL14372_Probes_73502
GPL14372_Probes_73503
GPL14372_Probes_73506
GPL14372_Probes_73507
GPL14372_Probes_73508
GPL14372_Probes_73510
Matching_cDNAFG100075Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_73499
GPL14372_Probes_73500
GPL14372_Probes_73501
GPL14372_Probes_73502
GPL14372_Probes_73503
GPL14372_Probes_73506
GPL14372_Probes_73507
GPL14372_Probes_73508
GPL14372_Probes_73510
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.84137From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated