WormBase Tree Display for CDS: PPA39303
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PPA39303 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 63 | |||
110 | 231 | |||||
507 | 567 | |||||
618 | 713 | |||||
1130 | 1261 | |||||
1372 | 1491 | |||||
1534 | 1671 | |||||
1728 | 1772 | |||||
1822 | 1980 | |||||
2053 | 2217 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S283-12.42 | ||
DB_remark | contains similarity to Pfam domain PF04826 (Armadillo-like); contains similarity to Interpro domains IPR011989 (Armadillo-like helical), IPR006911 (Armadillo repeat-containing domain), IPR016024 (Armadillo-type fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277672 | ||||
Corresponding_transcript | PPA39303.1 | |||||
Corresponding_protein | PP65605 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |