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WormBase Tree Display for CDS: PPA39506

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Name Class

PPA39506EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons146
209306
358423
492629
710823
DB_infoDatabasepristionchus.orgcdsgene-UMM-S296-3.32
DB_remarkcontains similarity to Pfam domain PF13815 (Iguana/Dzip1-like DAZ-interacting protein N-terminal); contains similarity to Interpro domain IPR032714 (Cilium assembly protein DZIP1, N-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00277875
Corresponding_transcriptPPA39506.1
Corresponding_proteinPP75390
Corresponding_oligo_setGPL14372_Probes_82727
GPL14372_Probes_82728
GPL14372_Probes_82729
GPL14372_Probes_82730
Microarray_resultsGPL14372_Probes_82727
GPL14372_Probes_82728
GPL14372_Probes_82729
GPL14372_Probes_82730
RNASeq_FPKMWBls:000003224.8997From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed19 Sep 2019 13:58:16WBPerson4055
Remark[190919 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated