WormBase Tree Display for CDS: PPA39519
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PPA39519 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 45 | |||
460 | 532 | |||||
803 | 898 | |||||
1193 | 1293 | |||||
1566 | 1655 | |||||
1959 | 2016 | |||||
2082 | 2110 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S296-6.15 | ||
DB_remark | contains similarity to Pfam domain PF13833 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR011992 (EF-hand domain pair) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00277888 | ||||
Corresponding_transcript | PPA39519.1 | |||||
Corresponding_protein | PP61026 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |