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WormBase Tree Display for CDS: PPA39551

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Name Class

PPA39551SMapS_parentSequencePPA_ChrII
StructureSource_exons196
220300
543653
811924
9941071
DB_infoDatabasepristionchus.orgcdsgene-UMM-S296-10.65
DB_remarkcontains similarity to Pfam domain PF03931 (Skp1 family, tetramerisation domain); contains similarity to Interpro domains IPR001232 (S-phase kinase-associated protein 1-like), IPR016897 (S-phase kinase-associated protein 1), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR016073 (SKP1 component, POZ domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00277920
Corresponding_transcriptPPA39551.1
Corresponding_proteinPP67782
Corresponding_oligo_setGPL14372_Probes_82487
Microarray_resultsGPL14372_Probes_82487
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010127.5163From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated