WormBase Tree Display for CDS: PPA39914

PPA39914 SMap: S_parent: Sequence: PPA_ChrII
  Structure: Source_exons (18)
  DB_info: Database: pristionchus.org cds gene-UMM-S387-3.2
    DB_remark: contains similarity to Pfam domain PF00498 (FHA domain); contains similarity to Interpro domains IPR008984 (SMAD/FHA domain superfamily), IPR042803 (Transcription factor 19), IPR011011 (Zinc finger, FYVE/PHD-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000253 (Forkhead-associated (FHA) domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00278283
    Corresponding_transcript: PPA39914.1
    Corresponding_protein: PP72523
    Corresponding_oligo_set: GPL14372_Probes_60625
      GPL14372_Probes_60626
      GPL14372_Probes_60628
      GPL14372_Probes_60629
    Matching_cDNA: BI500498 Inferred_automatically: transcript_builder.pl
      BQ087863 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_60625
      GPL14372_Probes_60626
      GPL14372_Probes_60628
      GPL14372_Probes_60629
    RNASeq_FPKM: WBls:0000032 11.9277 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated