WormBase Tree Display for CDS: PPA39918
expand all nodes | collapse all nodes | view schema
| PPA39918 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (23) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S387-4.17 | ||
| DB_remark | PPA-LRON-15 protein; contains similarity to Pfam domain PF13855 (Leucine rich repeat); contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype), IPR032675 (Leucine-rich repeat domain superfamily) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00278287 | ||||
| Corresponding_transcript | PPA39918.1 | |||||
| Corresponding_protein | PP73630 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
