WormBase Tree Display for CDS: PPA39920
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PPA39920 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 241 | |||
286 | 359 | |||||
404 | 472 | |||||
531 | 632 | |||||
812 | 910 | |||||
1097 | 1924 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S387-5.74 | ||
DB_remark | contains similarity to Pfam domain PF02520 (SXP/RAL-2 family protein Ani s 5-like, metal-binding domain); contains similarity to Interpro domain IPR003677 (SXP/RAL-2 family protein Ani s 5-like, cation-binding domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00278289 | ||||
Corresponding_transcript | PPA39920.1 | |||||
Corresponding_protein | PP58707 | |||||
RNASeq_FPKM | WBls:0000032 | 2.66827 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |