WormBase Tree Display for CDS: PPA39922
expand all nodes | collapse all nodes | view schema
PPA39922 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 87 | |||
163 | 264 | |||||
333 | 433 | |||||
586 | 691 | |||||
804 | 917 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S387-5.96 | ||
DB_remark | contains similarity to Pfam domain PF10237 (Probable N6-adenine methyltransferase); contains similarity to Interpro domains IPR039846 (Zinc finger CCHC domain-containing protein 4), IPR041370 (Methyltransferase EEF1AKMT1/ZCCHC4) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00278291 | ||||
Corresponding_transcript | PPA39922.1 | |||||
Corresponding_protein | PP55290 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |