WormBase Tree Display for CDS: PPA39925
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PPA39925 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 398 | |||
577 | 1102 | |||||
1680 | 1757 | |||||
1800 | 1916 | |||||
1965 | 2157 | |||||
2201 | 2325 | |||||
2374 | 2488 | |||||
2534 | 2871 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S387-6.52 | ||
DB_remark | contains similarity to Pfam domain PF12762 (ISXO2-like transposase domain); contains similarity to Interpro domain IPR024445 (ISXO2-like transposase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00278294 | ||||
Corresponding_transcript | PPA39925.1 | |||||
Corresponding_protein | PP68282 | |||||
RNASeq_FPKM | WBls:0000032 | 7.65601 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |