WormBase Tree Display for CDS: PPA39929
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PPA39929 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 82 | |||
146 | 542 | |||||
584 | 999 | |||||
1360 | 1467 | |||||
1636 | 2043 | |||||
3028 | 3440 | |||||
3446 | 3586 | |||||
3631 | 4005 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S387-6.82 | ||
DB_remark | contains similarity to Interpro domains IPR013762 (Integrase-like, catalytic domain superfamily), IPR043502 (DNA/RNA polymerase superfamily), IPR011010 (DNA breaking-rejoining enzyme, catalytic core) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00278298 | ||||
Corresponding_transcript | PPA39929.1 | |||||
Corresponding_protein | PP70317 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |