WormBase Tree Display for CDS: PPA39959
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PPA39959 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 67 | |||
410 | 547 | |||||
630 | 880 | |||||
962 | 1129 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S394-4.64 | ||
DB_remark | contains similarity to Pfam domains PF00438 (S-adenosylmethionine synthetase, N-terminal domain), PF02773 (S-adenosylmethionine synthetase, C-terminal domain); contains similarity to Interpro domains IPR022630 (S-adenosylmethionine synthetase, C-terminal), IPR022636 (S-adenosylmethionine synthetase superfamily), IPR022628 (S-adenosylmethionine synthetase, N-terminal), IPR002133 (S-adenosylmethionine synthetase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00278328 | ||||
Corresponding_transcript | PPA39959.1 | |||||
Corresponding_protein | PP59235 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 27.1637 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |