WormBase Tree Display for CDS: PPA39994
expand all nodes | collapse all nodes | view schema
PPA39994 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrX | |||
Structure | Source_exons | 1 | 31 | |||
844 | 909 | |||||
1194 | 1316 | |||||
1888 | 2003 | |||||
2287 | 2385 | |||||
2751 | 2831 | |||||
3081 | 3164 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S398-2.9 | ||
DB_remark | contains similarity to Pfam domain PF00454 (Phosphatidylinositol 3- and 4-kinase); contains similarity to Interpro domains IPR000403 (Phosphatidylinositol 3-/4-kinase, catalytic domain), IPR039756 (Type II phosphatidylinositol 4-kinase Lsb6/PI4K2) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00278363 | ||||
Corresponding_transcript | PPA39994.1 | |||||
Corresponding_protein | PP61193 | |||||
Corresponding_oligo_set | GPL14372_Probes_21910 | |||||
Microarray_results | GPL14372_Probes_21910 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |