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WormBase Tree Display for CDS: PPA40022

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Name Class

PPA40022EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequencePPA_ChrX
StructureSource_exons1157
344477
783851
9531021
DB_infoDatabasepristionchus.orgcdsgene-UMM-S398-4.139
DB_remarkcontains similarity to Pfam domain PF01060 (Transthyretin-like family); contains similarity to Interpro domains IPR038479 (Transthyretin-like superfamily), IPR001534 (Transthyretin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00278391
Corresponding_transcriptPPA40022.1
Corresponding_proteinPP25663
Corresponding_oligo_setGPL14372_Probes_74590
Microarray_resultsGPL14372_Probes_74590
RNASeq_FPKMWBls:000003214.2642From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated