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WormBase Tree Display for CDS: PPA40117

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Name Class

PPA40117SMapS_parentSequencePPA_ChrII
StructureSource_exons163
193304
347503
544623
667720
765913
9611014
DB_infoDatabasepristionchus.orgcdsgene-UMM-S421-2.142
DB_remarkPPA-MADF-5 protein; contains similarity to Pfam domain PF10545 (Alcohol dehydrogenase transcription factor Myb/SANT-like); contains similarity to Interpro domains IPR039353 (Transcription factor Adf-1), IPR006578 (MADF domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00278486
Corresponding_transcriptPPA40117.1
Corresponding_proteinPP69815
Corresponding_oligo_setGPL14372_Probes_64580
GPL14372_Probes_64581
Microarray_resultsGPL14372_Probes_64580
GPL14372_Probes_64581
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated