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WormBase Tree Display for CDS: PPA40124a

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Name Class

PPA40124aEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons166
115264
337460
540631
DB_infoDatabasepristionchus.orgcdsgene-UMM-S421-2.185
DB_remarkcontains similarity to Pfam domain PF00010 (Helix-loop-helix DNA-binding domain); contains similarity to Interpro domains IPR015660 (), IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
IsoformCurator_confirmedWBPerson4055
VisibleGeneWBGene00278493
Corresponding_transcriptPPA40124a.1
Corresponding_proteinPP66469
Corresponding_oligo_setGPL14372_Probes_64571
GPL14372_Probes_64572
Microarray_resultsGPL14372_Probes_64571
GPL14372_Probes_64572
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed18 Nov 2019 15:44:18WBPerson4055
Methodcurated