WormBase Tree Display for CDS: PPA40232
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PPA40232 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 121 | |||
168 | 305 | |||||
350 | 408 | |||||
453 | 512 | |||||
564 | 670 | |||||
718 | 790 | |||||
1038 | 1188 | |||||
1229 | 1338 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S473-0.39 | ||
DB_remark | PPA-COQ-6 protein; contains similarity to Pfam domain PF01494 (FAD binding domain); contains similarity to Interpro domains IPR036188 (FAD/NAD(P)-binding domain superfamily), IPR002938 (FAD-binding domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00278601 | ||||
Corresponding_transcript | PPA40232.1 | |||||
Corresponding_protein | PP69904 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |