WormBase Tree Display for CDS: PPA40241
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PPA40241 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 284 | |||
330 | 411 | |||||
466 | 618 | |||||
666 | 818 | |||||
880 | 966 | |||||
1009 | 1197 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S473-1.89 | ||
DB_remark | PPA-EGL-46 protein; contains similarity to Pfam domain PF12874 (Zinc-finger of C2H2 type); contains similarity to Interpro domains IPR042972 (Insulinoma-associated protein 1/2), IPR036236 (Zinc finger C2H2 superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00278610 | ||||
Corresponding_transcript | PPA40241.1 | |||||
Corresponding_protein | PP65930 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 5.11784 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |