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WormBase Tree Display for CDS: PPA40274

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Name Class

PPA40274SMapS_parentSequencePPA_ChrII
StructureSource_exons1107
152242
285407
DB_infoDatabasepristionchus.orgcdsgene-UMM-S498-0.73
DB_remarkPPA-OIG-2 protein; contains similarity to Pfam domain PF07679 (Immunoglobulin I-set domain); contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00278643
Corresponding_transcriptPPA40274.1
Corresponding_proteinPP22169
Corresponding_oligo_setGPL14372_Probes_84362
GPL14372_Probes_84363
Matching_cDNAEB183256Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_84362
GPL14372_Probes_84363
RNASeq_FPKMWBls:0000032285.8From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101168.857From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated