WormBase Tree Display for CDS: PPA40346

PPA40346 SMap: S_parent: Sequence: PPA_ChrIV
  Structure: Source_exons (100)
  DB_info: Database: pristionchus.org cds gene-UMM-S2838-3.7
    DB_remark: contains similarity to Pfam domains PF01697 (Glycosyltransferase family 92), PF07645 (Calcium-binding EGF domain), PF12947 (EGF domain); contains similarity to Interpro domains IPR024731 (EGF domain), IPR001881 (EGF-like calcium-binding domain), IPR009030 (Growth factor receptor cysteine-rich domain superfamily), IPR000742 (EGF-like domain), IPR008166 (Glycosyltransferase family 92)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
    End_not_found
  Visible: Gene: WBGene00278715
    Corresponding_transcript: PPA40346.1
    Corresponding_protein: PP63105
    Corresponding_oligo_set: GPL14372_Probes_87791
      GPL14372_Probes_87792
      GPL14372_Probes_87793
      GPL14372_Probes_87794
      GPL14372_Probes_87795
      GPL14372_Probes_87796
    Microarray_results: GPL14372_Probes_87791
      GPL14372_Probes_87792
      GPL14372_Probes_87793
      GPL14372_Probes_87794
      GPL14372_Probes_87795
      GPL14372_Probes_87796
    RNASeq_FPKM: WBls:0000032 0.312098 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.737104 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated