WormBase Tree Display for CDS: PPA41401
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PPA41401 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 15 | |||
128 | 208 | |||||
306 | 446 | |||||
529 | 637 | |||||
709 | 812 | |||||
862 | 1084 | |||||
1799 | 1908 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2840-55.52 | ||
DB_remark | contains similarity to Pfam domain PF00751 (DM DNA binding domain); contains similarity to Interpro domains IPR036407 (DM DNA-binding domain superfamily), IPR001275 (DM DNA-binding domain), IPR026607 (DMRT family) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00279770 | ||||
Corresponding_transcript | PPA41401.1 | |||||
Corresponding_protein | PP63988 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |