WormBase Tree Display for CDS: PPA41659
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| PPA41659 | SMap | S_parent | Sequence | PPA_ChrIV | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 48 | |||
| 221 | 297 | |||||
| 383 | 437 | |||||
| 567 | 683 | |||||
| 806 | 847 | |||||
| 1910 | 2854 | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S2840-83.54 | ||
| DB_remark | contains similarity to Pfam domain PF03564 (Protein of unknown function (DUF1759)); contains similarity to Interpro domain IPR005312 (Protein of unknown function DUF1759) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00280028 | ||||
| Corresponding_transcript | PPA41659.1 | |||||
| Corresponding_protein | PP52929 | |||||
| Corresponding_oligo_set | GPL14372_Probes_33922 | |||||
| Microarray_results | GPL14372_Probes_33922 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
