WormBase Tree Display for CDS: PPA41951
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PPA41951 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 9 | |||
55 | 192 | |||||
243 | 708 | |||||
717 | 759 | |||||
813 | 1097 | |||||
1252 | 1396 | |||||
1465 | 2447 | |||||
3285 | 3972 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-3.0 | ||
DB_remark | contains similarity to Pfam domain PF14529 (Endonuclease-reverse transcriptase); contains similarity to Interpro domains IPR005135 (Endonuclease/exonuclease/phosphatase), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00280320 | ||||
Corresponding_transcript | PPA41951.1 | |||||
Corresponding_protein | PP51529 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |