WormBase Tree Display for CDS: PPA41957
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PPA41957 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 84 | |||
223 | 286 | |||||
343 | 447 | |||||
575 | 612 | |||||
764 | 854 | |||||
1157 | 1304 | |||||
1848 | 2632 | |||||
6828 | 7306 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-4.54 | ||
DB_remark | contains similarity to Pfam domain PF00078 (Reverse transcriptase (RNA-dependent DNA polymerase)); contains similarity to Interpro domain IPR000477 (Reverse transcriptase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280326 | ||||
Corresponding_transcript | PPA41957.1 | |||||
Corresponding_protein | PP54152 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |