WormBase Tree Display for CDS: PPA41972
expand all nodes | collapse all nodes | view schema
PPA41972 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 17 | |||
294 | 367 | |||||
830 | 951 | |||||
1097 | 1219 | |||||
1306 | 1366 | |||||
2056 | 2137 | |||||
2411 | 2546 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-6.21 | ||
DB_remark | contains similarity to Pfam domain PF16016 (VAD1 Analog of StAR-related lipid transfer domain); contains similarity to Interpro domains IPR040147 (), IPR031968 (VASt domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280341 | ||||
Corresponding_transcript | PPA41972.1 | |||||
Corresponding_protein | PP63879 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |