WormBase Tree Display for CDS: PPA41988
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PPA41988 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (26) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-10.28 | ||
DB_remark | contains similarity to Pfam domain PF01019 (Gamma-glutamyltranspeptidase); contains similarity to Interpro domains IPR043137 (Gamma-glutamyltranspeptidase, small subunit), IPR000101 (Gamma-glutamyltranspeptidase), IPR043138 (Gamma-glutamyltranspeptidase, large subunit, C-terminal domain), IPR029055 (Nucleophile aminohydrolases, N-terminal) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280357 | ||||
Corresponding_transcript | PPA41988.1 | |||||
Corresponding_protein | PP54769 | |||||
Corresponding_oligo_set | GPL14372_Probes_81055 | |||||
Microarray_results | GPL14372_Probes_81055 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |