WormBase Tree Display for CDS: PPA42014
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PPA42014 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 63 | |||
1636 | 1709 | |||||
1776 | 1841 | |||||
1903 | 1969 | |||||
2028 | 2053 | |||||
3177 | 3243 | |||||
3386 | 3463 | |||||
3505 | 3603 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-15.84 | ||
DB_remark | contains similarity to Pfam domain PF01549 (ShK domain-like); contains similarity to Interpro domain IPR003582 (ShKT domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280383 | ||||
Corresponding_transcript | PPA42014.1 | |||||
Corresponding_protein | PP61726 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |