WormBase Tree Display for CDS: PPA42079

PPA42079 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 92
      333 444
      580 652
      705 832
      898 1414
      1506 1636
  DB_info: Database: pristionchus.org cds gene-UMM-S2844-26.43
    DB_remark: contains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00280448
    Corresponding_transcript: PPA42079.1
    Corresponding_protein: PP68752
    Matching_cDNA: FG096795 Inferred_automatically: transcript_builder.pl
      AI986929 Inferred_automatically: transcript_builder.pl
      AI989264 Inferred_automatically: transcript_builder.pl
      FG097102 Inferred_automatically: transcript_builder.pl
      AW115359 Inferred_automatically: transcript_builder.pl
      AW052272 Inferred_automatically: transcript_builder.pl
    RNASeq_FPKM: WBls:0000032 3.79781 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated