WormBase Tree Display for CDS: PPA42084
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PPA42084 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 116 | |||
168 | 204 | |||||
224 | 268 | |||||
405 | 496 | |||||
530 | 549 | |||||
571 | 679 | |||||
900 | 1005 | |||||
1084 | 1134 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-26.57 | ||
DB_remark | contains similarity to Pfam domain PF00085 (Thioredoxin); contains similarity to Interpro domains IPR013766 (Thioredoxin domain), IPR036249 (Thioredoxin-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280453 | ||||
Corresponding_transcript | PPA42084.1 | |||||
Corresponding_protein | PP60223 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |