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WormBase Tree Display for CDS: PPA42087

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Name Class

PPA42087SMapS_parentSequencePPA_ChrI
StructureSource_exons11522
20362205
24072670
46265069
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-27.57
DB_remarkcontains similarity to Pfam domains PF14529 (Endonuclease-reverse transcriptase), PF17921 (Integrase zinc binding domain); contains similarity to Interpro domains IPR005135 (Endonuclease/exonuclease/phosphatase), IPR041588 (Integrase zinc-binding domain), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00280456
Corresponding_transcriptPPA42087.1
Corresponding_proteinPP70580
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated