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WormBase Tree Display for CDS: PPA42088

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Name Class

PPA42088SMapS_parentSequencePPA_ChrI
StructureSource_exons (47)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-27.58
DB_remarkcontains similarity to Pfam domain PF02118 (Srg family chemoreceptor); contains similarity to Interpro domains IPR000609 (7TM GPCR, serpentine receptor class g (Srg)), IPR040298 ()
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Artificial_intronLow_quality_sequence
VisibleGeneWBGene00280457
Corresponding_transcriptPPA42088.1
Corresponding_proteinPP52466
Corresponding_oligo_setGPL14372_Probes_18366
GPL14372_Probes_18367
GPL14372_Probes_18369
GPL14372_Probes_18370
GPL14372_Probes_18372
GPL14372_Probes_69388
GPL14372_Probes_69390
Microarray_resultsGPL14372_Probes_18366
GPL14372_Probes_18367
GPL14372_Probes_18369
GPL14372_Probes_18370
GPL14372_Probes_18372
GPL14372_Probes_69388
GPL14372_Probes_69390
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.01643From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated