WormBase Tree Display for CDS: PPA42125
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PPA42125 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-34.37 | ||
DB_remark | contains similarity to Pfam domain PF01775 (Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A); contains similarity to Interpro domains IPR028877 (Large ribosomal subunit protein eL20), IPR023573 (Large ribosomal subunit protein eL20 domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280494 | ||||
Corresponding_transcript | PPA42125.1 | |||||
Corresponding_protein | PP72940 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |