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WormBase Tree Display for CDS: PPA42138

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Name Class

PPA42138SMapS_parentSequencePPA_ChrI
StructureSource_exons1109
208235
244381
430451
458622
666740
785805
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-37.41
DB_remarkcontains similarity to Pfam domain PF00270 (DEAD/DEAH box helicase); contains similarity to Interpro domains IPR011545 (DEAD/DEAH box helicase domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
End_not_found
VisibleGeneWBGene00280507
Corresponding_transcriptPPA42138.1
Corresponding_proteinPP54518
Corresponding_oligo_setGPL14372_Probes_33315
Microarray_resultsGPL14372_Probes_33315
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated