WormBase Tree Display for CDS: PPA42160
expand all nodes | collapse all nodes | view schema
PPA42160 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 84 | |||
175 | 237 | |||||
870 | 982 | |||||
1050 | 1150 | |||||
1218 | 1318 | |||||
1467 | 1595 | |||||
1696 | 1810 | |||||
1916 | 2076 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-41.9 | ||
DB_remark | contains similarity to Pfam domain PF00646 (F-box domain); contains similarity to Interpro domains IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280529 | ||||
Corresponding_transcript | PPA42160.1 | |||||
Corresponding_protein | PP71821 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 22.9679 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |