WormBase Tree Display for CDS: PPA42185
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PPA42185 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (20) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-45.13 | ||
DB_remark | contains similarity to Pfam domain PF15481 (Chondroitin proteoglycan 4); contains similarity to Interpro domain IPR029153 (Chondroitin proteoglycan 4) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280554 | ||||
Corresponding_transcript | PPA42185.1 | |||||
Corresponding_protein | PP51108 | |||||
Corresponding_oligo_set | GPL14372_Probes_33458 | |||||
GPL14372_Probes_91289 | ||||||
GPL14372_Probes_91290 | ||||||
Microarray_results | GPL14372_Probes_33458 | |||||
GPL14372_Probes_91289 | ||||||
GPL14372_Probes_91290 | ||||||
RNASeq_FPKM | WBls:0000032 | 4.31949 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 5.10144 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |