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WormBase Tree Display for CDS: PPA42187

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Name Class

PPA42187SMapS_parentSequencePPA_ChrI
StructureSource_exons (45)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-46.13
DB_remarkcontains similarity to Pfam domains PF01431 (Peptidase family M13), PF05649 (Peptidase family M13); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR042089 (Peptidase M13, domain 2), IPR018497 (Peptidase M13, C-terminal domain), IPR000718 (Peptidase M13), IPR008753 (Peptidase M13, N-terminal domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00280556
Corresponding_transcriptPPA42187.1
Corresponding_proteinPP65714
Corresponding_oligo_setGPL14372_Probes_91292
Microarray_resultsGPL14372_Probes_91292
RNASeq_FPKMWBls:00000323.40371From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.6662From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated