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WormBase Tree Display for CDS: PPA42220

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Name Class

PPA42220SMapS_parentSequencePPA_ChrI
StructureSource_exons1100
25702672
29493015
31713230
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2844-51.28
DB_remarkcontains similarity to Pfam domain PF04155 (Ground-like domain); contains similarity to Interpro domain IPR007284 (Ground-like domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00280589
Corresponding_transcriptPPA42220.1
Corresponding_proteinPP63657
Corresponding_oligo_setGPL14372_Probes_91424
GPL14372_Probes_91426
GPL14372_Probes_91427
Matching_cDNAFG101332Inferred_automaticallytranscript_builder.pl
FE933720Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_91424
GPL14372_Probes_91426
GPL14372_Probes_91427
RNASeq_FPKMWBls:0000032185.393From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010154.7641From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated