WormBase Tree Display for CDS: PPA42236
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PPA42236 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 66 | |||
109 | 259 | |||||
302 | 467 | |||||
523 | 608 | |||||
721 | 956 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-53.18 | ||
DB_remark | contains similarity to Pfam domain PF10545 (Alcohol dehydrogenase transcription factor Myb/SANT-like); contains similarity to Interpro domain IPR006578 (MADF domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280605 | ||||
Corresponding_transcript | PPA42236.1 | |||||
Corresponding_protein | PP63067 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |