Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA42444

expand all nodes | collapse all nodes | view schema

Name Class

PPA42444SMapS_parentSequencePPA_ChrX
StructureSource_exons (19)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2845-23.9
DB_remarkcontains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00280813
Corresponding_transcriptPPA42444.1
Corresponding_proteinPP70183
Corresponding_oligo_setGPL14372_Probes_50915
GPL14372_Probes_50916
Microarray_resultsGPL14372_Probes_50915
GPL14372_Probes_50916
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated