WormBase Tree Display for CDS: PPA42466
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PPA42466 | SMap | S_parent | Sequence | PPA_ChrX | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 139 | |||
186 | 274 | |||||
310 | 376 | |||||
476 | 578 | |||||
648 | 782 | |||||
832 | 925 | |||||
989 | 1122 | |||||
1253 | 1325 | |||||
1403 | 1469 | |||||
1564 | 1766 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2845-25.39 | ||
DB_remark | contains similarity to Pfam domain PF10326 (Serpentine type 7TM GPCR chemoreceptor Str); contains similarity to Interpro domain IPR019428 (7TM GPCR, serpentine receptor class r (Str)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00280835 | ||||
Corresponding_transcript | PPA42466.1 | |||||
Corresponding_protein | PP74297 | |||||
Corresponding_oligo_set | GPL14372_Probes_1617 | |||||
GPL14372_Probes_1618 | ||||||
GPL14372_Probes_1619 | ||||||
GPL14372_Probes_1620 | ||||||
GPL14372_Probes_1621 | ||||||
Microarray_results | GPL14372_Probes_1617 | |||||
GPL14372_Probes_1618 | ||||||
GPL14372_Probes_1619 | ||||||
GPL14372_Probes_1620 | ||||||
GPL14372_Probes_1621 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |