WormBase Tree Display for CDS: PPA42650
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| PPA42650 | SMap | S_parent | Sequence | PPA_ChrIV | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 135 | |||
| 236 | 322 | |||||
| 627 | 715 | |||||
| 1113 | 1240 | |||||
| 1712 | 1769 | |||||
| 2025 | 2252 | |||||
| 2431 | 2583 | |||||
| 2707 | 2779 | |||||
| 3278 | 3405 | |||||
| 4041 | 4149 | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S2847-29.37 | ||
| DB_remark | contains similarity to Pfam domain PF05741 (Nanos RNA binding domain); contains similarity to Interpro domains IPR038129 (Nanos domain superfamily), IPR024161 (Zinc finger, nanos-type) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Start_not_found | 1 | |||||
| Visible | Gene | WBGene00281019 | ||||
| Corresponding_transcript | PPA42650.1 | |||||
| Corresponding_protein | PP67656 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
