WormBase Tree Display for CDS: PPA42656
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PPA42656 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 62 | |||
330 | 404 | |||||
463 | 517 | |||||
673 | 749 | |||||
840 | 924 | |||||
1488 | 1498 | |||||
2241 | 2379 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2852-0.2 | ||
DB_remark | contains similarity to Pfam domain PF13087 (AAA domain); contains similarity to Interpro domains IPR041679 (DNA2/NAM7 helicase-like, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00281025 | ||||
Corresponding_transcript | PPA42656.1 | |||||
Corresponding_protein | PP52503 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |