WormBase Tree Display for CDS: PPA43040
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PPA43040 | SMap | S_parent | Sequence | PPA_ChrX | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 108 | |||
165 | 231 | |||||
796 | 896 | |||||
938 | 1012 | |||||
1172 | 1282 | |||||
1325 | 1389 | |||||
1431 | 1515 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2859-9.85 | ||
DB_remark | contains similarity to Pfam domain PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd); contains similarity to Interpro domain IPR019421 (7TM GPCR, serpentine receptor class d (Srd)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00281409 | ||||
Corresponding_transcript | PPA43040.1 | |||||
Corresponding_protein | PP72262 | |||||
Corresponding_oligo_set | GPL14372_Probes_39154 | |||||
GPL14372_Probes_39155 | ||||||
Microarray_results | GPL14372_Probes_39154 | |||||
GPL14372_Probes_39155 | ||||||
RNASeq_FPKM | WBls:0000032 | 7.88857 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |