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WormBase Tree Display for CDS: PPA43662

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Name Class

PPA43662SMapS_parentSequencePPA_ChrI
StructureSource_exons (26)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S7-53.6
DB_remarkcontains similarity to Pfam domain PF02516 (Oligosaccharyl transferase STT3, N-terminal); contains similarity to Interpro domain IPR003674 (Oligosaccharyl transferase, STT3 subunit)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00282031
Corresponding_transcriptPPA43662.1
Corresponding_proteinPP67715
Corresponding_oligo_setGPL14372_Probes_53426
GPL14372_Probes_53427
GPL14372_Probes_53428
GPL14372_Probes_53429
GPL14372_Probes_53430
Matching_cDNAEB183340Inferred_automaticallytranscript_builder.pl
EB182763Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_53426
GPL14372_Probes_53427
GPL14372_Probes_53428
GPL14372_Probes_53429
GPL14372_Probes_53430
RNASeq_FPKMWBls:000003222.6002From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010128.26From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated