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WormBase Tree Display for CDS: PPA43683

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Name Class

PPA43683SMapS_parentSequencePPA_ChrI
StructureSource_exons (18)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S7-63.37
DB_remarkPPA-ACS-9 protein; contains similarity to Pfam domains PF00501 (AMP-binding enzyme), PF13193 (AMP-binding enzyme C-terminal domain); contains similarity to Interpro domains IPR025110 (AMP-binding enzyme, C-terminal domain), IPR000873 (AMP-dependent synthetase/ligase domain), IPR042099 (ANL, N-terminal domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00282052
Corresponding_transcriptPPA43683.1
Corresponding_proteinPP61929
Corresponding_oligo_setGPL14372_Probes_53681
GPL14372_Probes_53682
Microarray_resultsGPL14372_Probes_53681
GPL14372_Probes_53682
RNASeq_FPKMWBls:00000325.25834From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated