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WormBase Tree Display for CDS: PPA43774

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Name Class

PPA43774SMapS_parentSequencePPA_ChrII
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S10-10.64
DB_remarkcontains similarity to Pfam domain PF00182 (Chitinase class I); contains similarity to Interpro domains IPR023346 (Lysozyme-like domain superfamily), IPR000726 (Glycoside hydrolase, family 19, catalytic)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00282143
Corresponding_transcriptPPA43774.1
Corresponding_proteinPP65487
Corresponding_oligo_setGPL14372_Probes_82244
GPL14372_Probes_82245
GPL14372_Probes_82246
GPL14372_Probes_82247
GPL14372_Probes_82249
GPL14372_Probes_82250
Matching_cDNAFE931700Inferred_automaticallytranscript_builder.pl
FE938148Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_82244
GPL14372_Probes_82245
GPL14372_Probes_82246
GPL14372_Probes_82247
GPL14372_Probes_82249
GPL14372_Probes_82250
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010115.4506From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated