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WormBase Tree Display for CDS: PPA43805

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Name Class

PPA43805SMapS_parentSequencePPA_ChrII
StructureSource_exons (25)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S10-20.15
DB_remarkPPA-HALY-1 protein; contains similarity to Pfam domain PF00221 (Aromatic amino acid lyase); contains similarity to Interpro domains IPR005921 (Histidine ammonia-lyase), IPR008948 (L-Aspartase-like), IPR024083 (Fumarase/histidase, N-terminal), IPR001106 (Aromatic amino acid lyase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00282174
Corresponding_transcriptPPA43805.1
Corresponding_proteinPP66332
Corresponding_oligo_setGPL14372_Probes_1915
GPL14372_Probes_38599
Microarray_resultsGPL14372_Probes_1915
GPL14372_Probes_38599
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.08612From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated