WormBase Tree Display for CDS: PPA43843
expand all nodes | collapse all nodes | view schema
PPA43843 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 115 | |||
1549 | 1682 | |||||
4748 | 4831 | |||||
5008 | 5067 | |||||
5243 | 5290 | |||||
5454 | 5527 | |||||
8034 | 8068 | |||||
8839 | 8909 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S10-35.29 | ||
DB_remark | contains similarity to Interpro domains IPR038111 (), IPR036390 (Winged helix DNA-binding domain superfamily), IPR001266 (Small ribosomal subunit protein eS19) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00282212 | ||||
Corresponding_transcript | PPA43843.1 | |||||
Corresponding_protein | PP67689 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |