WormBase Tree Display for CDS: PPA43858
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PPA43858 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 48 | |||
136 | 250 | |||||
512 | 612 | |||||
1368 | 1403 | |||||
1639 | 1719 | |||||
2094 | 2224 | |||||
2494 | 2604 | |||||
3051 | 3123 | |||||
3406 | 3462 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S10-41.31 | ||
DB_remark | contains similarity to Pfam domain PF00230 (Major intrinsic protein); contains similarity to Interpro domains IPR023271 (Aquaporin-like), IPR034294 (Aquaporin transporter), IPR000425 (Major intrinsic protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00282227 | ||||
Corresponding_transcript | PPA43858.1 | |||||
Corresponding_protein | PP58338 | |||||
Corresponding_oligo_set | GPL14372_Probes_89562 | |||||
Microarray_results | GPL14372_Probes_89562 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |